BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B02LP1|AL429995
(932 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig944 1261 0.0
3x_Contig371 440 e-123
>3x_Contig944
Length = 2546
Score = 1261 bits (634), Expect = 0.0
Identities = 646/651 (99%), Gaps = 1/651 (0%)
Strand = Plus / Plus
Query: 1 attcgagtaggtttcgcttcaactcaacagtcatttcaccagttactcggtacgtacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 attcgagtaggtttcgcttcaactcaacagtcatttcaccagttactcggtacgtacttc 1955
Query: 61 gcagttgattattcgaagagtaatccgatctccagagttctgacagacggtaatgtctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1956 gcagttgattattcgaagagtaatccgatctccagagttctgacagacggtaatgtctct 2015
Query: 121 cttcaattcatctcatctgcgctctctatgtttagttatcttcttttttttcatcttgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2016 cttcaattcatctcatctgcgctctctatgtttagttatcttcttttttttcatcttgcc 2075
Query: 181 gttcccttcggtaaacgtcaacgtgaaaaattcattagaaaggkaatgaaaacgtattga 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2076 gttcccttcggtaaacgtcaacgtgaaaaattcattagaaaggtaatgaaaacgtattga 2135
Query: 241 atgataaatgcgaagatggggacggkgagaagaaaggtatcggaggaaaccattcatgtg 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2136 atgataaatgcgaagatggggacggtgagaagaaaggtatcggaggaaaccattcatgtg 2195
Query: 301 ccanctcttagactgaggtcgaccataattcttcgtttccagtttgagtattgctcttct 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2196 ccatctcttagactgaggtcgaccataattcttcgtttccagtttgagtattgctcttct 2255
Query: 361 gatacgacttcatattcgtcttgtaacatgctgcctattctgacggcgata-sgttatcg 419
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2256 gatacgacttcatattcgtcttgtaacatgctgcctattctgacggcgatagcgttatcg 2315
Query: 420 aaatccgatccatcgtaataatcgaacttgacacggagttctcggtaccatttctcaccg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2316 aaatccgatccatcgtaataatcgaacttgacacggagttctcggtaccatttctcaccg 2375
Query: 480 tctattagttcttttgtgatcttgatagcttccatgatatcttcatcatttgttgttctc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2376 tctattagttcttttgtgatcttgatagcttccatgatatcttcatcatttgttgttctc 2435
Query: 540 atttgtgccgccatcttcttcattagcttgttatcgattgtactgtcctgatttctctgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2436 atttgtgccgccatcttcttcattagcttgttatcgattgtactgtcctgatttctctgt 2495
Query: 600 tggttgaagacaacgaacgagcaaagaagtaccagaccacaaaccaactgt 650
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2496 tggttgaagacaacgaacgagcaaagaagtaccagaccacaaaccaactgt 2546
>3x_Contig371
Length = 1168
Score = 440 bits (221), Expect = e-123
Identities = 233/237 (98%), Gaps = 1/237 (0%)
Strand = Plus / Minus
Query: 697 tggtagctgttacttcttcaggaagttcaaattcattgcacagagtcaccagttcagcgg 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 tggtagctgttacttcttcaggaagttcaaattcattgcacagagtcaccagttcagcgg 1109
Query: 757 tagacggtctatagtattttttgtatagcatgttccattcgttatacttacctcttttct 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 tagacggtctatagtattttttgtatagcatgttccattcgttatacttacctcttttct 1049
Query: 817 ttcttggtgaaggcgtgtatttagaaggggagtyacgaaagggtgactgtcttaatggag 876
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1048 ttcttggtgaaggcgtgtatttagaaggggagtcacgaaagggtgactgtcttaatggag 989
Query: 877 attcaggatcat-cyccactgatccaaacacttgtggtatattgatcatatcagtct 932
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 attcaggatcatcctcaactgatccaaacacttgtggtatattgatcatatcagtct 932
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7517
Number of Sequences: 1807
Number of extensions: 7517
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)